Tools‎ > ‎Bowtie2‎ > ‎

Install

How to install bowtie2 on Ubuntu/Linux?

download page
https://sourceforge.net/projects/bowtie-bio/files/bowtie2/


# create and go to install directory
cd $HOME/tools/bowtie2/

# download Ubuntu/Linux version
wget https://sourceforge.net/projects/bowtie-bio/files/bowtie2/2.3.3.1/bowtie2-2.3.3.1-linux-x86_64.zip/download


# decompress
unzip download

# add location to system PATH
export PATH=$HOME/tools/bowtie2/bowtie2-2.3.0:$PATH

# check installation
bowtie2 --help